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Publications Using Results Obtained With Imaris
Peer reviewed publications between 1990 and 2008 that are using Imaris in one of its configurations. If you know of any paper that is missing on this list please report it to publications@bitplane.com.
November
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Matrix metalloproteinase-13 is activated and is found in the nucleus of neural cells after cerebral ischemia |
Journal of Cerebral Blood Flow & Metabolism Nov 2008; 1-13 |
Cuadrado E, Rosell A, Borrell-Pagès M, García-Bonilla L, Hernández-Guillamon M, Ortega-Aznar A, and Montaner J | Neuroscience | 3D-Visualization | PubMed |
| The actin regulator coronin 1A is mutant in a thymic egress–deficient mouse strain and in a patient with severe combined immunodeficiency |
Nature Immunology Nov. 2008; 9 (11); 1307 - 1315 |
Shiow LR, Roadcap DW, Paris K, Watson SR, Grigorova IL, Lebet T, An J, Xu Y, Jenne CN, Föger N, Sorensen RU, Goodnow CC, Bear JE, Puck JM, Cyster JG |
Immunology |
3D-Visualization Tracking |
PubMed |
| Vascular Endothelial Growth Factor-A and Platelet-Derived Growth Factor-B Combination Gene Therapy Prolongs Angiogenic Effects via Recruitment of Interstitial Mononuclear Cells and Paracrine Effects Rather Than Improved Pericyte Coverage of Angiogenic Vessels |
Circ. Res., Nov 2008; 103: 1092 - 1099 |
Korpisalo P, Karvinen H, Rissanen TT, Kilpijoki J, Marjomäki V, Baluk P, McDonald DM, Cao Y, Eriksson U, Alitalo K, and Ylä-Herttuala S |
Cardiovascular Research |
3D-Visualization |
PubMed |
| Thymocyte-Dendritic Cell Interactions near Sources of CCR7 Ligands in the Thymic Cortex |
J. Immunol., Nov 2008; 181: 7014 - 7023 |
Ladi E, Schwickert TA, Chtanova T, Chen Y, Herzmark P, Yin X, Aaron H, Chan SW, Lipp M, Roysam B, and Robey EA |
Immunology |
3D-Visualization Tracking |
PubMed |
| Laminin and biomimetic extracellular elasticity enhance functional differentiation in mammary epithelia |
The EMBO Journal Nov 2008 27, 2829–2838 |
Alcaraz J, Xu R, Mori H, Nelson CM, Mroue R, Spencer VA, Brownfield D, Radisky DC, Bustamante C, and Bissell MJ | Cell Biology Molecular Biology |
Visualization |
|
| Secreted Frizzled-Related Protein-1 Enhances Mesenchymal Stem Cell Function in Angiogenesis and Contributes to Neovessel Maturation | Stem Cells, Nov 2008; 26: 2991 - 3001 |
Dufourcq P, Descamps B, Tojais NF, Leroux L, Oses P, Daret D, Moreau C, Lamazière JMD, Couffinhal T, and Duplàa C | Stem Cell Research |
3D-Visualization | PubMed |
| Chlamydophila pneumoniae HflX belongs to an uncharacterized family of conserved GTPases and associates with the Escherichia coli 50S large ribosomal subunit |
Microbiology, Nov 2008; 154: 3537 - 3546 |
Polkinghorne A, Ziegler U, González-Hernández Y, Pospischil A, Timms P, and Vaughan L |
Microbiology |
3D-Visualization |
PubMed |
| Actin-driven chromosomal motility leads to symmetry breaking in mammalian meiotic oocytes |
Nature Cell Biology Nov 2008 10: 1301 - 1308 |
Li H, Guo F, Rubinstein B, and Li R | Cell Biology |
3D-Visualization Tracking |
PubMed |
| Escherichia coli Harboring a Natural IncF Conjugative F Plasmid Develops Complex Mature Biofilms by Stimulating Synthesis of Colanic Acid and Curli |
J. Bacteriol., Nov 2008; 190: 7479 - 7490 |
May T and Okabe S |
Microbiology |
3D-Visualization |
PubMed |
October
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| PubMed | |||||
| Enhancing the Reliability and Throughput of Neurosphere Culture on Hydrogel Microwell Arrays |
Stem Cells, Oct 2008; 26: 2586 - 2594 |
Cordey M, Limacher M, Kobel S, Taylor V, and Lutolf MP |
Stem Cell | 3D-Visualization |
PubMed |
| Tumor suppressor schwannomin/merlin is critical for the organization of Schwann cell contacts in peripheral nerves |
J Neurosci. Oct 2008 15;28(42) 10472-81 |
Denisenko N, Cifuentes-Diaz C, Irinopoulou T, Carnaud M, Benoit E, Kawakita MN, Chareyre F, Giovannini M, Girault JA, and Goutebroze L | Neuroscience, Disease |
3D-Visualization |
PubMed |
| Disruption of the plasmodium falciparum PfPMT gene results in a complete loss of phosphatidylcholine biosynthesis via the SDPM pathway and severe growth and survival defects | J. Biol. Chem., Oct 2008; 283: 27636 - 27643 |
Witola WH, El Bissati K, Pessi G, Xie C, Roepe PD, and Ben Mamoun C | Biochemistry, Disease | 3D-Visualization Spot Detection Deconvolution |
|
| Nuclear α 1-Adrenergic Receptors Signal Activated ERK Localization to Caveolae in Adult Cardiac Myocytes | Circ. Res., Oct 2008; 103: 992 - 100 | Wright CD, Chen Q, Baye NL, Huang Y, Healy CL, Kasinathan S, and O'Connell TD | Cardiology | Colocalization 3D-Visualization | PubMed |
| Association of the Cellular Coactivator HCF-1 with the Golgi Apparatus in Sensory Neurons | J. Virol., Oct 2008; 82: 9555 - 9563 | Kolb G and Kristie TM | Virology Neuroscience |
3D-Visualization | PubMed |
| Arf GTPase-activating Protein ASAP1 Interacts with Rab11 Effector FIP3 and Regulates Pericentrosomal Localization of Transferrin Receptor–positive Recycling Endosome |
Mol. Biol. Cell, Oct 2008; 19: 4224 - 4237 |
Inoue H, Ha VL, Prekeris R and Randazzo PA |
Molecular Biology |
Colocalization |
PubMed |
| Interplay between Cyclic AMP-Cyclic AMP Receptor Protein and Cyclic di-GMP Signaling in Vibrio cholerae Biofilm Formation |
J. Bacteriol., Oct 2008; 190: 6646 - 6659 |
Fong JCN and Yildiz FH |
Microbiology | 3D-Visualization |
PubMed |
| Tumor Recovery by Angiogenic Switch from Sprouting to Intussusceptive Angiogenesis after Treatment with PTK787/ZK222584 or Ionizing Radiation |
Am. J. Pathol., Oct 2008; 173: 1173 - 1185 |
Hlushchuk R, Riesterer O, Baum O, Wood J, Gruber G, Pruschy M, and Djonov V |
Pathology |
3D-Visualization |
PubMed |
| The Dynamics of Mammalian P Body Transport, Assembly, and Disassembly In Vivo |
Mol. Biol. Cell, Oct 2008; 19: 4154 - 4166 |
Aizer A, Brody Y, Ler LW, Sonenberg N, Singer RH, and Shav-Tal Y |
Molecular Biology |
3D-Visualization |
PubMed |
| CD20, CD3, and CD40 Ligand Microclusters Segregate Three-Dimensionally In Vivo at B-Cell-T-Cell Immunological Synapses after Viral Immunity in Primate Brain |
J. Virol., Oct 2008; 82: 9978 - 9993 |
Barcia C, Gomez A, de Pablos V, Fernández-Villalba E, Liu C, Kroeger KM, Martín J, Barreiro AF, Castro MG, Lowenstein PR, and Herrero MT |
Virology Immunology Neuroscience |
3D-Visualization |
PubMed |
| Epidermal Growth Factor–induced Enhancement of Glioblastoma Cell Migration in 3D Arises from an Intrinsic Increase in Speed But an Extrinsic Matrix- and Proteolysis-dependent Increase in Persistence |
Mol. Biol. Cell, Oct 2008; 19: 4249 - 4259 |
Kim HD, Guo TW, Wu AP, Wells A, Gertler FB, and Lauffenburger DA |
Molecular Biology |
3D-Tracking |
PubMed |
| A Role for DEAD Box 1 at DNA Double-Strand Breaks |
Mol. Cell. Biol., Oct 2008; 28: 6413 - 6425 |
Li L, Monckton EA, and Godbout R |
Molecular Biology Cell Biology |
3D-Visualization Colocalization |
PubMed |
| Microarchitecture of Three-Dimensional Scaffolds Influences Cell Migration Behavior via Junction Interactions |
Biophys. J., Oct 2008; 95: 4013 - 4024 |
Harley BAC, Kim HD, Zaman MH, Yannas IV, Lauffenburger DA, and Gibson LJ |
Cell Biology Biophysics |
3D-Visualization 4D-Tracking |
PubMed |
| Different Types of nsP3-Containing Protein Complexes in Sindbis Virus-Infected Cells |
J. Virol., Oct 2008; 82: 10088 - 10101 |
Gorchakov R, Garmashova N, Frolova E, and Frolov I |
Virology |
3D-Visualization Colocalization |
PubMed |
| Visualizing stromal cell dynamics in different tumor microenvironments by spinning disk confocal microscopy |
Dis. Model. Mech., Sep/Oct 2008; 1: 155 - 167 |
Egeblad M, Ewald AJ, Askautrud HA, Truitt ML, Welm BE, Bainbridge E, Peeters G, Krummel MF, and Werb Z |
Cancer Research Disease |
Visualization Spot Detection Tracking |
PubMed |
September
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| A Novel Stem Cell Source for Vasculogenesis in Ischemia: Subfraction of Side Population Cells from Dental Pulp |
Stem Cells, Sep 2008; 26: 2408 - 2418 |
Iohara K, Zheng L, Wake H, Ito M, Nabekura J, Wakita H, Nakamura H, Into T, Matsushita K, and Nakashima M |
Stem Cell Research |
3D-Visualization |
PubMed |
| Biofilm Plaque and Hydrodynamic Effects on Mass Transfer, Fluoride Delivery and Caries | J Am Dent Assoc, Sep 2008; 139: 1182 - 1190 | Stoodley P, Wefel J, Gieseke A, deBeer D, and von Ohle C | Microbiology Dental Research |
3D-Visualization | PubMed |
| Distinct requirements for activation-induced cell surface expression of preformed Fas/CD95 ligand and cytolytic granule markers in T cells |
Cell Death and Differentiation, Sep 2008; 1-10 |
Kassahn D, Nachbur U, Conus S, Micheau O, Schneider P, Simon HU, Brunner T | Immunology Pathology |
Colocalization | PubMed |
| Finite element 3D reconstruction of the pulmonary acinus imaged by synchrotron X-ray tomography |
J Appl Physiol, Sep 2008; 105: 964 - 976 |
Tsuda A, Filipovic N, Haberthür D, Dickie R, Matsui Y, Stampanoni M, and Schittny JC |
Physiology |
3D-Visualization |
PubMed |
| Reshaping of the endoplasmic reticulum limits the rate for nuclear envelope formation |
J. Cell Biol., Sep 2008; 182: 911 - 924 |
Anderson DJ and Hetzer MW |
Cell Biology |
4D-Visualization |
PubMed |
| Fibroblastic Reticular Cells Guide T Lymphocyte Entry into and Migration within the Splenic T Cell Zone |
J. Immunol., Sep 2008; 181: 3947 - 3954 |
Bajénoff M, Glaichenhaus N, and Germain RN |
Immunology |
4D-Visualization |
PubMed |
| Synapse formation and clustering of neuroligin-2 in the absence of GABAA receptors |
PNAS, Sep 2008; 105: 13151 - 13156 |
Patrizi A, Scelfo B, Viltono L, Briatore F, Fukaya M, Watanabe M, Strata P, Varoqueaux F, Brose N, Fritschy JM, and Sassoè-Pognetto M |
Neuroscience |
Colocalization |
PubMed |
| TLR ligand–induced podosome disassembly in dendritic cells is ADAM17 dependent |
J. Cell Biol., Sep 2008; 182: 993 - 1005 |
West MA, Prescott AR, Chan KM, Zhou Z, Rose-John S, Scheller J, and Watts C |
Cell Biology Immunology |
Measurements | PubMed |
| Host Inactivation of Bacterial Lipopolysaccharide Prevents Prolonged Tolerance Following Gram-Negative Bacterial Infection |
Cell Host & Microbe, Sep 2008, 4 (3): 293-302 |
Lu M, Varley AW, Ohta S, Hardwick J, and Munford RS |
Microbiology |
3D-Visualization |
|
| Altered Sensory Experience Induces Targeted Rewiring of Local Excitatory Connections in Mature Neocortex |
J. Neurosci., Sep 2008; 28: 9249 - 9260 |
Cheetham CEJ, Hammond MSL, McFarlane R, and Finnerty GT |
Neuroscience |
Visualization Measurements FilamentTracer AutoDeblur |
PubMed |
| Distinct sequential cell behaviours direct primitive endoderm formation in the mouse blastocyst |
Development, Sep 2008; 135: 3081 - 3091 |
Plusa B, Piliszek A, Frankenberg S, Artus J, and Hadjantonakis AK |
Development | 3D-Visualization Measurements |
PubMed |
| Neuroendocrine cells of nasal mucosa are a cellular source of brain-derived neurotrophic factor |
Eur. Respir. J., Sep 2008; 32: 769 - 774 |
Jornot L, Lacroix JS, and Rochat T |
Medical Research |
3D-Visualization | PubMed |
| Peptide-Grafted Nanodiamonds: Preparation, Cytotoxicity and Uptake in Cells |
ChemBioChem., Sept 2008 9(13): 2113-2119 |
Vial S, Mansuy C, Sagan S, Irinopoulou T, Burlina F, Boudou JP, Chassaing G, and Lavielle S. | Biochemistry | 3D-Visualization | PubMed |
| Arginine deiminase has multiple regulatory roles in the biology of Giardia lamblia |
J. Cell Sci., Sep 2008; 121: 2930 - 2938 |
Touz MC, Rópolo AS, Rivero MR, Vranych CV, Conrad JT, Svard SG, and Nash TE |
Cell Biology Disease |
Visualization |
PubMed |
| A Missense Mutation in the Sodium Phosphate Co-transporter Slc34a1 Impairs Phosphate Homeostasis |
J. Am. Soc. Nephrol., Sep 2008; 19: 1753 - 1762 |
Iwaki T, Sandoval-Cooper MJ, Tenenhouse MS, and Castellino FJ |
Nephrology |
3D-Visualizaton | PubMed |
August
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Dap160/intersectin binds and activates aPKC to regulate cell polarity and cell cycle progression | Development, Aug 2008; 135: 2739 - 2746 | Chabu C and Doe CQ | Development | 4D-Visualization | PubMed |
| Muscle-wide secretion of a miniaturized form of neural agrin rescues focal neuromuscular innervation in agrin mutant mice |
PNAS, Aug 2008; 105: 11406 - 11411 | Lin S, Maj M, Bezakova G, Magyar JP, Brenner HR, and Ruegg MA | Neurosciences | Visualization |
|
| Elevated protein tyrosine phosphatase activity provokes Eph/ephrin-facilitated adhesion of pre-B leukemia cells | Blood, Aug 2008; 112: 721 - 732 | Wimmer-Kleikamp SH, Nievergall E, Gegenbauer K, Adikari S, Mansour M, Yeadon T, Boyd AW, Patani NR, and Lackmann M | Molecular Biology |
FilamentTracer | PubMed |
| Distribution, Organization, and Ecology of Bacteria in Chronic Wounds | J. Clin. Microbiol., Aug 2008; 46: 2717 - 2722 | Kirketerp-Møller K, Jensen PØ , Fazli M, Madsen KG, Pedersen J, Moser C, Tolker-Nielsen T, Høiby N, Givskov M, and Bjarnsholt T | Microbiology | 3D-Visualization | PubMed |
| Reactive oxygen species act remotely to cause synapse loss in a Drosophila model of developmental mitochondrial encephalopathy |
Development, Aug 2008; 135: 2669 - 2679 |
Mast JD, Tomalty KMH, Vogel H, and Clandinin TR |
Development |
Visualization |
|
| Origin and shaping of the laterality organ in zebrafish |
Development, Aug 2008; 135: 2807 - 2813 | Oteíza P, Köppen M, Concha ML, and Heisenberg CP | Development |
Measurements |
|
| GATA4 is a survival factor in adult cardiac myocytes but is not required for α1A-adrenergic receptor survival signaling | Am J Physiol Heart Circ Physiol, Aug 2008; 295: H699 - H707 | Huang Y, Wright CD, Kobayashi S, Healy CL, Elgethun M, Cypher A, Liang Q, and O'Connell TD | Cardiology | Visualization | PubMed |
July
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Widespread Changes in Dendritic Spines in a Model of Alzheimer's Disease |
Cereb. Cortex, July 2008 | Knafo S, Alonso-Nanclares L, Gonzalez-Soriano J, Merino-Serrais P, Fernaud-Espinosa I, Ferrer I, and DeFelipe J | Neurosciences Disease |
3D-Visualization Measurements |
|
| Oxidised LDL internalisation by the LOX-1 scavenger receptor is dependent on a novel cytoplasmic motif and is regulated by dynamin-2 |
J. Cell Sci., Jul 2008; 121: 2136 - 2147 | Murphy JE, Vohra RS, Dunn S, Holloway ZG, Monaco AP, Homer-Vanniasinkam S, Walker JH, and Ponnambalam S |
Cell Biology Disease |
Colocalization |
|
| Switching on and off fear by distinct neuronal circuits | Nature, Jul 2008; 454: 600-606 |
Herry C, Ciocchi S, Senn V, Demmou L, Müller C, Lüthi A | Neurosciences | Visualization Measurements |
PubMed |
| The Proline-Rich Sequence of CD3ε as an Amplifier of Low-Avidity TCR Signaling |
J. Immunol., Jul 2008; 181: 243 - 255 |
Tailor P, Tsai S, Shameli A, Serra P, Wang J, Robbins S, Nagata M, Szymczak-Workman AL, Vignali DAA, and Santamaria P | Immunology |
3D-Visualization |
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| Dendritic Cell Internalization of Foot-and-Mouth Disease Virus: Influence of Heparan Sulfate Binding on Virus Uptake and Induction of the Immune Response |
J. Virol., Jul 2008; 82: 6379 - 6394 |
Harwood LJ, Gerber H, Sobrino F Summerfield A, and McCullough KC |
Virology |
Visualization |
|
| Th1 and Th2 Cells Form Morphologically Distinct Immunological Synapses |
J. Immunol., Jul 2008; 181: 393 - 399 |
Thauland TJ, Koguchi Y, Wetzel SA, Dustin ML, and Parker DC |
Immunology |
Colocalization |
|
| Dynamic Movement of the Calcium Sensor STIM1 and the Calcium Channel Orai1 in Activated T Cells: Puncta and Distal Caps | Mol. Biol. Cell, Jul 2008; 19: 2802 - 2817 |
Barr VA, Bernot KM, Srikanth S, Gwack Y, Balagopalan L, Regan CK, Helman DJ, Sommers CL, Oh-hora M, Rao A, and Samelson LE | Molecular Biology |
3D-Visualization |
|
| High Resolution Crystal Structure and in vivo Function of a Kinesin-2 Homolog in Giardia intestinalis | Mol. Biol. Cell, Jul 2008; 19: 3124 - 3137 | Hoeng JC, Dawson SC, House SA, Sagolla MS, Pham JK, Mancuso JJ, Löwe J, and Cande WZ | Molecular Biology, Cell Biology | 3D-Visualization Measurements |
|
June
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Direct Thy-1/αVβ3 integrin interaction mediates neuron to astrocyte communication | BBA- Molecular Cell Research, June 2008; 1783 (6); 1111-1120 | Hermosilla T, Muñoz D, Herrera-Molina R, Valdivia A, Muñoz N, Nham SU, Schneider P, Burridge K, Quest AFG and Leyton L | Molecular Biology, Cell Biology |
3D-Visualization |
Pub Med |
| Astrocyte Leptin Receptor (ObR) and Leptin Transport in Adult-Onset Obese Mice |
Endocrinology, Jun 2008; 149: 2798 - 2806 |
Pan W, Hsuchou H, He Y, Sakharkar A, Cain C, Yu C, and Kastin AJ |
Endocinology |
Colocalization |
|
| Multipathway Model Enables Prediction of Kinase Inhibitor Cross-Talk Effects on Migration of Her2-Overexpressing Mammary Epithelial Cells |
Mol. Pharmacol., Jun 2008; 73: 1668 - 1678 |
Kumar N, Afeyan R, Kim HD, and Lauffenburger DA |
Pharmacology |
Tracking |
|
| Recombinant, refolded tetrameric p53 and gonadotropin-releasing hormone-p53 slow proliferation and induce apoptosis in p53-deficient cancer cells |
Mol. Cancer Ther., Jun 2008; 7: 1420 - 1429 |
LaFevre-Bernt M, Wu S, and Lin X |
Cancer Research |
Colocalization |
|
| RelA Ser276 Phosphorylation Is Required for Activation of a Subset of NF-kB-Dependent Genes by Recruiting Cyclin-Dependent Kinase 9/Cyclin T1 Complexes |
Mol. Cell. Biol., Jun 2008; 28: 3623 - 3638 |
Nowak DE, Tian B, Jamaluddin M, Boldogh I, Vergara LA, Choudhary S, and Brasier AR |
Molecular Biology |
Visualization Colocalization |
|
| Contribution of Macromolecular Structure to the Retention of Low-Density Lipoprotein at Arterial Branch Points |
Circulation, Jun 2008; 117: 2919 - 2927 |
Kwon GP, Schroeder JL, Amar MJ, Remaley AT, and Balaban RS |
Cardiology, Molecular Biology |
3D-Visualization Colocalization |
|
| Subnuclear localization and mobility are key indicators of PAX3 dysfunction in Waardenburg syndrome |
Hum. Mol. Genet., 15 June 2008; 17: 1825 - 1837 |
Corry GN, Hendzel MJ, and Underhill DA |
Genetics |
3D-Visualization | |
| Blocking of Bacterial Biofilm Formation by a Fish Protein Coating |
Appl. Envir. Microbiol., June 1, 2008; 74: 3551 - 3558 |
Vejborg MR and Klemm P |
Microbiology |
3D-Visualization |
|
| Identification of Proteins Associating with Glycosylphosphatidylinositol- Anchored T-Cadherin on the Surface of Vascular Endothelial Cells: Role for Grp78/BiP in T-Cadherin-Dependent Cell Survival |
Mol. Cell. Biol., Jun 2008; 28: 4004 - 4017 |
Philippova M, Ivanov D, Joshi MB, Kyriakakis E, Rupp K, Afonyushkin T, Bochkov V, Erne P, and Resink TJ | Molecular Biology |
Colocalization |
May
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Multidimensional fluorescence microscopy of multiple organelles in Arabidopsis seedlings |
Plant Methods, May 2008, 4:9 | Kato N, Reynolds D, Brown ML, Boisdore M, Fujikawa Y, Morales A, and Meisel LA |
Plant Biology |
3D-Visualization | |
| Syncoilin is required for generating maximum isometric stress in skeletal muscle but dispensable for muscle cytoarchitecture |
Am J Physiol Cell Physiol, May 2008; 294: C1175 - C1182 |
Zhang J, Bang ML, Gokhin DS, Lu Y, Cui L, Li X, Gu Y, Dalton ND, Scimia MC, Peterson KL, Lieber RL, and Chen J |
Cell Biology, Physiology |
Visualization |
|
| Accurate Balance of the Polarity Kinase MARK2/Par-1 Is Required for Proper Cortical Neuronal Migration |
J. Neurosci., May 2008; 28: 5710 - 5720 |
Sapir T, Sapoznik S, Levy T, Finkelshtein D, Shmueli A, Timm T, Mandelkow EM, and Reiner O |
Neurosciences, Disease | Visualization Tracking |
|
| Rapid leukocyte migration by integrin-independent flowing and squeezing |
Nature 453, May 2008; 51 - 55 | Lämmermann T, Bader BL, Monkley SJ, Worbs T, Wedlich-Söldner R, Hirsch K, Keller M, Förster R, Critchley DR, Fässler R and Sixt M |
Immunology |
Tracking |
|
| Stage independent chloroquine resistance and chloroquine toxicity revealed via spinning disk confocal microscopy | Molecular & Biochemical Parasitology 159, May 2008; 7–23 |
Gligorijevic B, Purdy K, Elliott DA, Cooper RA, and Roepe PD |
Parasitology | 3D-Visualization Spot Detection AutoAligner Deconvolution |
PubMed |
| The R1 Conjugative Plasmid Increases Escherichia coli Biofilm Formation through an Envelope Stress Response |
Appl. Envir. Microbiol., May 1, 2008; 74: 2690 - 2699 |
Yang X, Ma Q, and Wood TK |
Microbiology |
3D-Visualization |
|
| Molecular Mechanism of Systemic Delivery of Neural Precursor Cells to The Brain: Assembly of Brain Endothelial Apical Cups and Control of Transmigration by CD44 |
Stem Cells, May 2008; |
Rampon C, Weiss N, Deboux C, Chaverot N, Miller F, Buchet D, Tricoire-Leignel H, Cazaubon S, Baron-Van Evercooren A, and Olivier Couraud PO |
Melecular Biology, Stem Cell Research |
3D-Visualization |
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| Live Visualization of Herpes Simplex Virus Type 1 Compartment Dynamics |
J. Virol., May 2008; 82: 4974 - 4990 |
de Oliveira AP, Glauser DL, Laimbacher AS, Strasser R, Schraner EM, Wild P, Ziegler U, Breakefield XO, Ackermann M, and Fraefel C |
Virology |
3D-Visualization |
April
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Dynamics of the Microglial/Amyloid Interaction Indicate a Role in Plaque Maintenance |
J. Neurosci., Apr 2008; 28: 4283 - 4292 |
Bolmont T, Haiss F, Eicke D, Radde R, Mathis CA, Klunk WE, Kohsaka S, Jucker M, and Calhoun ME |
Neurosciences, Disease |
3D Visualization |
|
| Genome-wide analysis of signaling networks regulating fatty acid–induced gene expression and organelle biogenesis |
J. Cell Biol., Apr 2008; 181: 281 - 292 |
Saleem RA, Knoblach B, Mast FD, Smith JJ, Boyle J, Dobson CM, Long-O'Donnell R, Rachubinski RA, and Aitchison JD |
Cell Biology |
Visualization Spot Detection Measurements |
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| Dendritic cells in islets of Langerhans constitutively present β cell-derived peptides bound to their class II MHC molecules |
PNAS, Apr 2008; 105: 6121 - 6126 |
Calderon B, Suri A, Miller MJ, and Unanue ER |
Parasitology, Immunology |
3D-Visualization |
|
| MUC1 Initiates Src-CrkL-Rac1/Cdc42–Mediated Actin Cytoskeletal Protrusive Motility after Ligating Intercellular Adhesion Molecule-1 |
Mol. Cancer Res., Apr 2008; 6: 555 - 567 | Shen Q, Rahn JJ, Zhang J, Gunasekera N, Sun X, Shaw ARE, Hendzel MJ, Hoffman P, Bernier A, and Hugh JC |
Cancer Research |
3D-Visualization |
|
| Elevated protein tyrosine phosphatase activity provokes Eph/ephrin-facilitated adhesion of pre-B leukemia cells |
Blood, Apr 2008 |
Wimmer-Kleikamp SH, Nievergall E, Gegenbauer K, Adikari S, Mansour M, Yeadon T, Boyd AW, Patani NR, and Lackmann M |
Molecular Biology, Cancer Research |
FilamentTracer |
|
| Biofilm Induced Tolerance towards Antimicrobial Peptides |
PLoS ONE. April 2008; 3(4):e1891 |
Folkesson A, Haagensen JA, Zampaloni C, Sternberg C, and Molin S | Microbiology |
3D-Visualization |
|
| PRC1 and Suv39h specify parental asymmetry at constitutive heterochromatin in early mouse embryos |
Nature Genetics, April 2008; 40, 411 - 420 |
Puschendorf M, Terranova R, Boutsma E, Mao X, Isono KI, Brykczynska U, Kolb C, Otte AP, Koseki H, Orkin SH, van Lohuizen M, and Peters AHFM |
Genetics, Embryology |
3D-Visualization Spot Detection |
PubMed |
| Inn1 couples contraction of the actomyosin ring to membrane ingression during cytokinesis in budding yeast |
Nature Cell Biology, April 2008; 10, 395 - 406 |
Sanchez-Diaz CA, Marchesi V, Murray S, Jones R, Pereira G, Edmondson R, Allen T, and Labib K |
Cell Biology |
Visualization |
PubMed |
| The integrity of a lamin-B1-dependent nucleoskeleton is a fundamental determinant of RNA synthesis in human cells |
J. Cell Sci., April 2008; 121: 1014 - 1024 |
Tang CW, Maya-Mendoza A, Martin C, Zeng K, Chen S, Feret D, Wilson SA, and Jackson DA |
Cell Biology |
Visualization |
PubMed |
| In Situ Growth Rates and Biofilm Development of Pseudomonas aeruginosa Populations in Chronic Lung Infections |
J. Bacteriol., April 2008; 190: 2767 - 2776 |
Yang L, Haagensen JAJ, Jelsbak L, Johansen HK, Sternberg C, Høiby N, and Molin S |
Microbiology | Visualization | PubMed |
March
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| HIV-1 envelope protein binds to and signals through integrin α4β7, the gut mucosal homing receptor for peripheral T cells |
Nature Immunology, Mar 2008; 9, 301 - 309 |
Arthos J, Cicala C, Martinelli E, Macleod K, Van Ryk D, Wei D, Xiao Z, Veenstra TD, Conrad TP, Lempicki RA, McLaughlin S, Pascuccio M, Gopaul R, McNally J, Cruz CC, Censoplano N, Chung E, Reitano KN, Kottilil S, Goode DJ, and Fauci AS |
Immunology, Disease |
Visualization | PubMed |
| Catch of the day: zebrafish as a human cancer model | Oncogene, Mar 2008; |
Stoletov K and Klemke R |
Cancer Reserach |
3D-Visualization | PubMed |
| SLAC1 is required for plant guard cell S-type anion channel function in stomatal signalling |
Nature, Mar 2008; 452(7186): 487-91 |
Vahisalu T, Kollist H, Wang YF, Nishimura N, Chan WY, Valerio G, Lamminmäki A, Brosché M, Moldau H, Desikan R, Schroeder JI, and Kangasjärvi J | Plant Biology |
3D-Visualization | PubMed |
| The Role of Nerve- versus Muscle-Derived Factors in Mammalian Neuromuscular Junction Formation |
J. Neurosci., Mar 2008; 28: 3333 - 3340 |
Lin S, Landmann L, Ruegg MA, and Brenner HR |
Neurosciences |
3D-Visualization Colocalization | PubMed |
| The Drosophila pheromone cVA activates a sexually dimorphic neural circuit |
Nature, Mar 2008; 452(7186): 473-7 |
Datta SR, Vasconcelos ML, Ruta V, Luo S, Wong A, Demir E, Flores J, Balonze K, Dickson BJ, Axel R. |
Neurosciences |
3D-Visualization |
PubMed |
| Caspase-8 is activated by cathepsin D initiating neutrophil apoptosis during the resolution of inflammation |
J. Exp. Med., Mar 2008; 205: 685 - 698 |
Conus S, Perozzo R, Reinheckel T, Peters C, Scapozza L, Yousefi S, and Simon HU |
Experimental Medicine |
Colocalization |
PubMed |
| Transforming Growth Factor β Controls the Directional Migration of Hepatocyte Cohorts by Modulating Their Adhesion to Fibronectin | Mol. Biol. Cell, Mar 2008; 19: 945 - 956 | Binamé F, Lassus L and Hibner U | Molecular Biology | 3D-Visualization | PubMed |
| Association of guanine nucleotide-exchange protein BIG1 in HepG2 cell nuclei with nucleolin, U3 snoRNA, and fibrillarin | PNAS, Mar 2008; 105: 3357 - 3361 | Padilla PI, Uhart M, Pacheco-Rodriguez G, Peculis BA, Moss J, and Vaughan M | Cell Biology | Colocalization | PubMed |
| Kaposi's sarcoma-associated herpesvirus ORF57 functions as a viral splicing factor and promotes the expression of intron-containing viral lytic genes in spliceosome-mediated RNA splicing |
J. Virol., Mar 2008; 82: 2792 - 2801 |
Majerciak V, Yamanegi K, Allemand E, Kruhlak M, Krainer AR, and Zheng ZM |
Virology, Cancer Research | Measurements |
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| The larval head of Raphidia (Raphidioptera, Insecta) and its phylogenetic significance | Zoology, March 2008; 111 (2): 89-113 |
Beutel RG and Ge SQ | Morphology, Zoology |
3D-Visualization | Pub Med |
| ARS2 Is a Conserved Eukaryotic Gene Essential for Early Mammalian Development |
Mol. Cell. Biol., Mar 2008; 28: 1503 - 1514 |
Wilson MD, Wang D, Wagner R, Breyssens H, Gertsenstein M, Lobe C, Lu X, Nagy A, Burke RD, Koop BF, and Howard PL |
Developmental Biology |
Measurements |
PubMed |
| Inhibition of Multiple Vascular Endothelial Growth Factor Receptors (VEGFR) Blocks Lymph Node Metastases but Inhibition of VEGFR-2 Is Sufficient to Sensitize Tumor Cells to Platinum-Based Chemotherapeutics |
Cancer Res., Mar 2008; 68: 1581 - 1592 |
Sini P, Samarzija I, Baffert F, Littlewood-Evans A, Schnell C, Theuer A, Christian S, Boos A, Hess-Stumpp H, Foekens JA, Setyono-Han B, Wood J and Hynes NE |
Cancer Research |
Measurements |
PubMed |
| Vascularization of the dorsal root ganglia and peripheral nerve of the mouse: implications for chemical-induced peripheral sensory neuropathies |
Mol Pain. 2008 Mar 19;4:10 |
Jimenez-Andrade JM, Herrera MB, Ghilardi JR, Vardanyan M, Melemedjian OK, and Mantyh PW |
Neurosciences, Disease |
3D-Visualization |
|
| Side Population Does Not Define Stem Cell-Like Cancer Cells in the Adrenocortical Carcinoma Cell Line NCI h295R |
Endocrinology, Mar 2008; 149: 1314 - 1322 |
Lichtenauer UD, Shapiro I, Geiger K, Quinkler M, Fassnacht M, Nitschke R, Rückauer KD, and Beuschlein F |
Endocrinology, Cancer Research |
3D-Visualization 4D-Visualization Spot Detection |
PubMed |
February
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| Chlamydophila pneumoniae derived from inclusions late in the infectious cycle induce aponecrosis in human aortic endothelial cells |
BMC Microbiol. 2008 Feb 19;8:32 |
Marino J, Stoeckli I, Walch M, Latinovic-Golic S, Sundstroem H, Groscurth P, Ziegler U, and Dumrese C |
Microbiology, Disease |
Colocalization |
|
| The marine lipopeptide somocystinamide A triggers apoptosis via caspase 8 |
PNAS, Feb 2008; 105: 2313 - 2318 |
Wrasidlo W, Mielgo A, Torres VA, Barbero S, Stoletov K, Suyama TL, Klemke RL, Gerwick WH, Carson DA, and Stupack DG |
Cancer Reserach |
Visualization |
PubMed |
| Evidence and structural mechanism for late lung alveolarization |
Am J Physiol Lung Cell Mol Physiol, Feb 2008; 294: L246 - L254 |
Schittny JC, Mund SI and Stampanoni M |
Physiology, Anatomy, Developmental Biology |
3D-Visualization |
PubMed |
| Characterization of Transplanted Green Fluorescent Protein+ Bone Marrow Cells into Adipose Tissue |
Stem Cells, Feb 2008; 26: 330 - 338 |
Tomiyama K, Murase N, Stolz DB, Toyokawa H, O'Donnell DR, Smith DM, Dudas JR, J. Rubin P, and Marra KG |
Stem Cell Research |
3D-Visualization Measurements |
PubMed |
| Spatial mapping of the neurite and soma proteomes reveals a functional Cdc42/Rac regulatory network |
PNAS, Feb 2008; 105: 1931 - 1936 |
Pertz OC, Wang Y, Yang F, Wang W, Gay LJ, Gristenko MA, Clauss TR, Anderson DJ, Liu T, Auberry KJ, Camp DG, Smith RD, and Klemke RL |
Cell Biology, Neurosciences, Proteomics |
3D-Visualization 4D-Visualization |
PubMed |
| Follicular growth and oocyte competence in the in vitro cultured mouse follicle: effects of gonadotrophins and steroids |
Mol. Hum. Reprod., Feb 2008; 14: 75 - 83 |
Murray AA, Swales AKE, Smith RE, Molinek MD, Hillier SG, and Spears N |
Reproductive Biology |
Visualization |
PubMed |
| Functional endogenous LINE-1 retrotransposons are expressed and mobilized in rat chloroleukemia cells |
Nucleic Acids Res., Feb 2008; 36: 648 - 665 |
Kirilyuk A, Tolstonog GV, Damert A, Held U, Hahn S, Löwer R, Buschmann C, Horn AV, Traub P, and Schumann GG |
Nucleic Acids Research, Cancer Research |
3D-Visualization |
|
| Mast cells possess distinct secretory granule subsets whose exocytosis is regulated by different SNARE isoforms |
PNAS, Feb 2008; 105: 2580 - 2585 |
Puri N and Roche PA |
Immunology |
Colocalization |
PubMed |
| Developmental maturation of synaptic and extrasynaptic GABAA receptors in mouse thalamic ventrobasal neurones |
J. Physiol., Feb 2008; 586: 965 - 987 |
Peden DR, Petitjean CM, Herd MB, Durakoglugil MS, Rosahl TW, Wafford K, Homanics GE, Belelli D, Fritschy JM, and Lambert JJ |
Neurosciences, Developmental Biology |
Visualization Measurments |
PubMed |
| Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast |
Genome Res., Feb 2008; 18: 261 - 271 |
Schober H, Kalck V, Vega-Palas MA, Van Houwe G, Sage D, Unser M, Gartenberg MR, and Gasser SM |
Genomics |
4D-Tracking Spot Detection |
PubMed |
| A Novel Role for PA28γ-Proteasome in Nuclear Speckle Organization and SR Protein Trafficking |
Mol. Biol. Cell, Feb 2008; | Baldin V, Militello M, Thomas Y, Doucet C, Fic W, Boireau S, ariel-Encontre I, Piechaczyk M, Bertrand E, Tazi J, and Coux O | Molecular Biology | 3D-Visualization |
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| Differential Molecular and Anatomical Basis for B Cell Migration into the Peritoneal Cavity and Omental Milky Spots | J. Immunol., Feb 2008; 180: 2196 - 2203 | Berberich S, Dähne S, Schippers A, Peters T, Müller W, Kremmer E, Förster R, and Pabst O | Immunology | Visualization | PubMed |
| Head morphology of Caurinus (Boreidae, Mecoptera) and its phylogenetic implications |
Arthropod Structure & Development, Feb 2008; 418–433 | Beutel RG, Friedrich F , and Whiting MF | Morphology, Development |
AutoAligner | PubMed |
| IL-13-Mediated Gender Difference in Susceptibility to Autoimmune Encephalomyelitis | J. Immunol., Feb 2008; 180: 2679 - 2685 | Sinha S, Kaler LJ, Proctor TM, Teuscher C, Vandenbark AA, and Offner H | Immunology | Visualization | PubMed |
| Visualization of a proteasome-independent intermediate during restriction of HIV-1 by rhesus TRIM5α | J. Cell Biol., Feb 2008; 180: 549 - 561 |
Campbell EM, Perez O, Anderson JL, and Hope TJ | Cell Biology | Visualization Measurments |
PubMed |
| Analysis of the Cell Adhesion Molecule Sticks-and-Stones Reveals Multiple Redundant Functional Domains, Protein-Interaction Motifs and Phosphorylated Tyrosines that direct Myoblast Fusion in Drosophila melanogaster | Genetics, Feb 2008; | Kocherlakota KS, Wu JM, McDermott J, and Abmayr SM | Genetics | Visualization | PubMed |
| A Sphingolipid Inhibitor Induces a Cytokinesis Arrest and Blocks Stage Differentiation in Giardia lamblia | Antimicrob. Agents Chemother., Feb 2008; 52: 563 - 569 | Sonda S, Stefanic S, and Hehl AB | Parasitology | 3D-Visualization | PubMed |
January
| Title | Journal | Author | Research | Category | Article |
|---|---|---|---|---|---|
| The thorax of /Zorotypus/ (Hexapoda, Zoraptera) and a new nomenclature for the musculature of Neoptera |
Arthropod Structure & Development, Jan 2008; 37(1): 29-54. |
Friedrich F and Beutel RG | Morphology Development |
AutoAligner 3D-Visualization |
PubMed |
| Reversal of pathological pain through specific spinal GABAA receptor subtype | Nature, Jan 2008; 451(7176) :330-4 | Knabl J, Witschi R, Hösl K, Reinold H, Zeilhofer UB, Ahmadi S, Brockhaus J, Sergejeva M, Hess A, Brune K, Fritschy JM, Rudolph U, Möhler H, Zeilhofer HU |
Neurosciences, Disease |
Visualization |
PubMed |
| hVAPB, the causative gene of a heterogeneous group of motor neuron diseases in humans, is functionally interchangeable with its Drosophila homologue DVAP-33A at the neuromuscular junction | Hum. Mol. Genet., Jan 2008; 17: 266 - 280 | Chai A, Withers J, Koh YH, Parry K, Bao H, Zhang B, Budnik V, and Pennetta G | Genetics | 3D-Visualization Measurements |
PubMed |
| Retinal progenitor cells can produce restricted subsets of horizontal cells | PNAS, Jan 2008; 105: 192 - 197 | Rompani SB and Cepko CL | Developmental Biology | 3D-Visualization Measurements |
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| Comparison of antimicrobial effect on biofilm of chlorine, silver ion and tobramycin | Antimicrob. Agents Chemother., Jan 2008 | Kim J, Pitts B, Stewart PS, Camper A, and Yoon J | Microbiology | 3D-Visualization | PubMed |
| Impaired cytoadherence of Plasmodium falciparum-infected erythrocytes containing sickle hemoglobin | PNAS, Jan 2008; 105: 991 - 996 | Cholera R, Brittain NJ, Gillrie MR, Lopera-Mesa TM, Diakité SAS, Arie T, Krause MA, Guindo A, Tubman A, Fujioka H, Diallo DA, Doumbo OK, Ho M, Wellems TE, and Fairhurst RM | Disease | Visualization |
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| c-Src-Mediated Epithelial Cell Migration and Invasion Regulated by PDZ Binding Site | Mol. Cell. Biol., Jan 2008; 28: 642 - 655 | Baumgartner M, Radziwill G, Lorger M, Weiss A, and Moelling K | Molecular Biology | Visualization | PubMed |
| Regulation of Endothelial Cell Cytoskeletal Reorganization by a Secreted Frizzled-Related Protein-1 and Frizzled 4- and Frizzled 7-Dependent Pathway: Role in Neovessel Formation | Am. J. Pathol., Jan 2008; 172: 37 - 49 | Dufourcq P, Leroux L, Ezan J, Descamps B, Lamazière JMD, Costet P, Basoni C, Moreau C, Deutsch U, Couffinhal T, and Duplàa C | Developmental Biology | 3D-Visualization Measurements |
PubMed |
| SAGA-mediated H2B deubiquitination controls the development of neuronal connectivity in the Drosophila visual system |
EMBO J., Jan 2008; 27(2):394-405 |
Weake VM, Lee KK, Guelman S, Lin CH, Seidel C, Abmayr SM, and Workman JL |
Neurosciences, Development | 3D-Visualization Measurements | PubMed |
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